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  5. Solyc10g077120

Solyc10g077120


Description : Photosystem II core complex proteins psbY (AHRD V3.3 *** A0A061EES6_THECC)


Gene families : OG_42_0005644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g077120
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_36701 No alias photosystem ii core complex proteins psby, chloroplastic 0.06 Orthogroups_2024-Update
At1g67740 No alias Putative uncharacterized protein... 0.05 Orthogroups_2024-Update
Bradi3g13970 No alias photosystem II BY 0.05 Orthogroups_2024-Update
Brara.G02560.1 No alias component *(PsbY) of PS-II complex 0.05 Orthogroups_2024-Update
Brara.G02733.1 No alias component *(PsbY) of PS-II complex 0.03 Orthogroups_2024-Update
Cre10.g452100 No alias photosystem II BY 0.03 Orthogroups_2024-Update
Glyma.05G172300 No alias photosystem II BY 0.07 Orthogroups_2024-Update
Glyma.11G245400 No alias photosystem II BY 0.04 Orthogroups_2024-Update
Mp8g12730.1 No alias component PsbY of PS-II complex 0.04 Orthogroups_2024-Update
Potri.010G052000 No alias photosystem II BY 0.03 Orthogroups_2024-Update
Pp1s101_95V6 No alias photosystem ii protein 0.05 Orthogroups_2024-Update
Pp1s221_76V6 No alias photosystem ii protein 0.04 Orthogroups_2024-Update
Seita.6G082000.1 No alias component *(PsbY) of PS-II complex 0.04 Orthogroups_2024-Update
Sobic.007G023300.1 No alias component *(PsbY) of PS-II complex 0.07 Orthogroups_2024-Update
Sopen10g028800 No alias Photosystem II protein Y (PsbY) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0030145 manganese ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 159 191
IPR009388 PSII_PsbY 87 119
No external refs found!