1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_4685g0010

MA_4685g0010


Description : (at5g55840 : 385.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 380.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 770.0) & (original description: no original description)


Gene families : OG_42_0001385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001385_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_4685g0010
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
MA_854602g0010 No alias (at1g63080 : 271.0) Transacting siRNA generating locus.... 0.05 Orthogroups_2024-Update
PSME_00049152-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 130 161
IPR002885 Pentatricopeptide_repeat 410 441
IPR002885 Pentatricopeptide_repeat 235 266
IPR002885 Pentatricopeptide_repeat 63 112
IPR002885 Pentatricopeptide_repeat 343 392
IPR002885 Pentatricopeptide_repeat 518 567
IPR002885 Pentatricopeptide_repeat 448 497
IPR002885 Pentatricopeptide_repeat 273 322
IPR002885 Pentatricopeptide_repeat 658 707
IPR002885 Pentatricopeptide_repeat 728 777
IPR002885 Pentatricopeptide_repeat 588 637
IPR002885 Pentatricopeptide_repeat 168 217
No external refs found!