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  5. MA_47319g0010

MA_47319g0010


Description : (at3g55240 : 96.7) Overexpression leads to PEL (Pseudo-Etiolation in Light) phenotype.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: developmental process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G28990.1); Has 220 Blast hits to 220 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description)


Gene families : OG_42_0001173 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_47319g0010
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
A4A49_24509 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_29299 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At5g02580 No alias Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0] 0.04 Orthogroups_2024-Update
MA_138753g0010 No alias (at3g55240 : 95.1) Overexpression leads to PEL... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006476 CHP01589_pln 22 73
No external refs found!