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  5. Solyc10g078320

Solyc10g078320


Description : cell division cycle 48 (AHRD V3.3 *** AT3G09840.1)


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g078320
Cluster HCCA clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G082131 No alias cell division cycle 48C 0.03 Orthogroups_2024-Update
GRMZM2G315264 No alias Cam interacting protein 111 0.03 Orthogroups_2024-Update
Seita.8G093400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G098800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00000525.10 No alias (at3g01610 : 444.0) AAA-type ATPase - Over 90%... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 428 557
IPR003959 ATPase_AAA_core 755 886
No external refs found!