- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at3g43430 : 102.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G20885.1); Has 6030 Blast hits to 6013 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1395; Fungi - 381; Plants - 3597; Viruses - 16; Other Eukaryotes - 641 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)
Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_4795437g0010 | |
| Cluster | HCCA clusters: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_03376 | No alias | hypothetical protein | 0.01 | Orthogroups_2024-Update | |
| A4A49_28369 | No alias | e3 ubiquitin-protein ligase rha1b | 0.03 | Orthogroups_2024-Update | |
| At3g61460 | No alias | BRH1 RING finger protein [Source:UniProtKB/TrEMBL;Acc:Q9XF92] | 0.02 | Orthogroups_2024-Update | |
| Bradi1g51897 | No alias | brassinosteroid-responsive RING-H2 | 0.02 | Orthogroups_2024-Update | |
| Bradi3g16540 | No alias | brassinosteroid-responsive RING-H2 | 0.02 | Orthogroups_2024-Update | |
| Bradi3g51810 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.G00433.1 | No alias | E3 ubiquitin ligase *(XERICO) | 0.02 | Orthogroups_2024-Update | |
| Brara.I02341.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G071277 | No alias | brassinosteroid-responsive RING-H2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G093800 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.05G182000 | No alias | RING-H2 finger A2A | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G210000 | No alias | brassinosteroid-responsive RING-H2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.07G068000 | No alias | brassinosteroid-responsive RING-H2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.16G034100 | No alias | brassinosteroid-responsive RING-H2 | 0.04 | Orthogroups_2024-Update | |
| Glyma.18G235600 | No alias | brassinosteroid-responsive RING-H2 | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G005330.5 | No alias | E3 ubiquitin ligase *(BRH) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os07g48680 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_10433991g0020 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| MA_10434104g0010 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
| MA_15246g0010 | No alias | (at2g04240 : 83.2) Encodes a small protein with an... | 0.03 | Orthogroups_2024-Update | |
| MA_169947g0010 | No alias | (at3g61460 : 156.0) Encodes a novel ring finger protein... | 0.05 | Orthogroups_2024-Update | |
| MA_7553g0010 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
| Potri.007G086200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.014G087700 | No alias | brassinosteroid-responsive RING-H2 | 0.03 | Orthogroups_2024-Update | |
| Seita.1G273100.1 | No alias | E3 ubiquitin ligase *(BRH) | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G239200.2 | No alias | E3 ubiquitin ligase *(XERICO) | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G123300.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G280900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G281400.1 | No alias | E3 ubiquitin ligase *(BRH) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006820 | anion transport | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |