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  5. Solyc01g096680

Solyc01g096680


Description : Microtubule associated family protein (AHRD V3.3 *** B9GX96_POPTR)


Gene families : OG_42_0000245 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g096680
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
103447 No alias microtubule-associated proteins 65-1 0.07 Orthogroups_2024-Update
A4A49_40675 No alias 65-kda microtubule-associated protein 5 0.06 Orthogroups_2024-Update
At2g38720 No alias 65-kDa microtubule-associated protein 5... 0.05 Orthogroups_2024-Update
At3g60840 No alias 65-kDa microtubule-associated protein 4... 0.03 Orthogroups_2024-Update
At5g51600 No alias 65-kDa microtubule-associated protein 3... 0.04 Orthogroups_2024-Update
Brara.A01663.1 No alias microtubule-associated protein *(MAP65-2) 0.03 Orthogroups_2024-Update
Brara.A02806.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.H01542.1 No alias microtubule-associated protein *(MAP65-2) 0.03 Orthogroups_2024-Update
Brara.J00973.1 No alias microtubule-associated protein *(MAP65-2) 0.03 Orthogroups_2024-Update
Brara.K01451.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre14.g614050 No alias microtubule-associated protein 65-8 0.03 Orthogroups_2024-Update
Glyma.09G268800 No alias Microtubule associated protein (MAP65/ASE1) family protein 0.04 Orthogroups_2024-Update
Glyma.10G178100 No alias Microtubule associated protein (MAP65/ASE1) family protein 0.1 Orthogroups_2024-Update
Glyma.13G189600 No alias microtubule-associated protein 65-5 0.04 Orthogroups_2024-Update
Glyma.14G018300 No alias microtubule-associated proteins 65-1 0.03 Orthogroups_2024-Update
Glyma.20G212100 No alias Microtubule associated protein (MAP65/ASE1) family protein 0.06 Orthogroups_2024-Update
Kfl00072_0120 kfl00072_0120_v1.1 (at2g01910 : 319.0) Binds microtubules. Induces a... 0.01 Orthogroups_2024-Update
MA_10426277g0020 No alias (at5g51600 : 280.0) Mutant has defective roots.... 0.06 Orthogroups_2024-Update
Pp1s153_98V6 No alias microtubule-associated protein map65-1a 0.03 Orthogroups_2024-Update
Seita.4G136600.1 No alias microtubule-associated protein *(MAP65-2) 0.03 Orthogroups_2024-Update
Seita.9G114600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G136000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g003120 No alias Microtubule associated protein (MAP65/ASE1 family) 0.03 Orthogroups_2024-Update
evm.model.contig_3488.5 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
evm.model.tig00021318.70 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!