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  5. Solyc10g078490

Solyc10g078490


Description : ripening-related mRNA


Gene families : OG_42_0002927 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g078490
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Potri.002G227500 No alias Aquaporin-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0019478 D-amino acid catabolic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046416 D-amino acid metabolic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 4 223
No external refs found!