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  5. MA_491032g0010

MA_491032g0010


Description : (at4g02780 : 134.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o04408|ksa_pea : 130.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (reliability: 268.0) & (original description: no original description)


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_491032g0010
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Brara.H00876.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Glyma.09G122500 No alias terpene synthase 03 0.03 Orthogroups_2024-Update
Glyma.13G304700 No alias terpene synthase 02 0.03 Orthogroups_2024-Update
MA_10025722g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10430954g0010 No alias (at1g61680 : 139.0) terpene synthase 14 (TPS14);... 0.05 Orthogroups_2024-Update
MA_70145g0010 No alias (at4g16740 : 253.0) Encodes an (E,E)-alpha-farnesene... 0.04 Orthogroups_2024-Update
MA_8002141g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_9461183g0010 No alias (at4g16740 : 171.0) Encodes an (E,E)-alpha-farnesene... 0.03 Orthogroups_2024-Update
PSME_00003265-RA No alias (at4g02780 : 372.0) Catalyzes the conversion of... 0.03 Orthogroups_2024-Update
PSME_00003483-RA No alias (p93665|dcs1_goshi : 253.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
PSME_00004472-RA No alias (at3g25810 : 152.0) Terpenoid cyclases/Protein... 0.05 Orthogroups_2024-Update
PSME_00007330-RA No alias (at4g16740 : 150.0) Encodes an (E,E)-alpha-farnesene... 0.03 Orthogroups_2024-Update
PSME_00009159-RA No alias (p59287|cass_ricco : 229.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00010279-RA No alias (at4g02780 : 364.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
PSME_00010326-RA No alias (p59287|cass_ricco : 263.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00011600-RA No alias (p59287|cass_ricco : 229.0) Casbene synthase,... 0.05 Orthogroups_2024-Update
PSME_00018711-RA No alias (p93665|dcs1_goshi : 196.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
PSME_00032510-RA No alias (at4g16730 : 184.0) In the Col ecotype, no functional... 0.03 Orthogroups_2024-Update
PSME_00034478-RA No alias (at3g25810 : 192.0) Terpenoid cyclases/Protein... 0.04 Orthogroups_2024-Update
PSME_00034701-RA No alias (p59287|cass_ricco : 249.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00035829-RA No alias (q40577|5eas_tobac : 197.0) Aristolochene synthase (EC... 0.03 Orthogroups_2024-Update
PSME_00044370-RA No alias (at4g16730 : 128.0) In the Col ecotype, no functional... 0.04 Orthogroups_2024-Update
Potri.011G031800 No alias terpene synthase-like sequence-1,8-cineole 0.05 Orthogroups_2024-Update
Solyc01g105960 No alias (E)-beta-ocimene synthase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 73 277
No external refs found!