Description : (at5g64950 : 115.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)
Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_493420g0010 | |
Cluster | HCCA clusters: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g45330 | No alias | Mitochondrial transcription termination factor family protein | 0.04 | Orthogroups_2024-Update | |
Bradi3g00773 | No alias | Mitochondrial transcription termination factor family protein | 0.04 | Orthogroups_2024-Update | |
Bradi4g02280 | No alias | Mitochondrial transcription termination factor family protein | 0.05 | Orthogroups_2024-Update | |
PSME_00000444-RA | No alias | (at1g79220 : 82.4) Mitochondrial transcription... | 0.04 | Orthogroups_2024-Update | |
PSME_00009256-RA | No alias | (at1g62110 : 82.4) Mitochondrial transcription... | 0.06 | Orthogroups_2024-Update | |
PSME_00038108-RA | No alias | (at5g64950 : 81.3) Mitochondrial transcription... | 0.03 | Orthogroups_2024-Update | |
PSME_00051879-RA | No alias | (at5g64950 : 109.0) Mitochondrial transcription... | 0.02 | Orthogroups_2024-Update | |
Seita.6G130600.1 | No alias | mTERF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.004G235300.1 | No alias | mTERF-type transcription factor | 0.04 | Orthogroups_2024-Update | |
Solyc04g072540 | No alias | Mitochondrial transcription termination factor family... | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
MF | GO:0050661 | NADP binding | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
No external refs found! |