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  5. Solyc10g078820

Solyc10g078820


Description : Phosphatase 2C family protein (AHRD V3.3 *** A0A061F4N6_THECC)


Gene families : OG_42_0000281 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g078820
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G113040.5 No alias clade D phosphatase 0.04 Orthogroups_2024-Update
Kfl00332_0120 kfl00332_0120_v1.1 (at5g66080 : 266.0) Protein phosphatase 2C family... 0.01 Orthogroups_2024-Update
Sopen10g029420 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update
Sopen10g029430 No alias Protein phosphatase 2C 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 73 305
No external refs found!