1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_52379g0010

MA_52379g0010


Description : (at2g40260 : 115.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_52379g0010
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
405704 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g00550 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g20520 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G123600 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.08G305000 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.09G113000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00003323-RA No alias (at3g24120 : 251.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.011G006350 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G032700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s490_9V6 No alias myb-cc type transfactor 0.02 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G106300.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Sobic.010G224200.1 No alias transcription factor *(CLAUSA) 0.05 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 21 71
No external refs found!