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  5. MA_526361g0010

MA_526361g0010


Description : (at1g12220 : 150.0) Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.; RESISTANT TO P. SYRINGAE 5 (RPS5); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G12280.1). & (reliability: 296.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_526361g0010
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
At1g12220 No alias Disease resistance protein [Source:UniProtKB/TrEMBL;Acc:Q56YM8] 0.04 Orthogroups_2024-Update
Brara.I05124.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g10910 No alias NB-ARC/LRR disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.018G137900 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!