1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_53162g0020

MA_53162g0020


Description : (at5g43740 : 114.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_53162g0020
Cluster HCCA clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
At1g52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
At1g63350 No alias Disease resistance protein (CC-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g43730 No alias Probable disease resistance protein At5g43730... 0.04 Orthogroups_2024-Update
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Brara.F00321.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I01184.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01920.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G032602 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
MA_10436684g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_733g0010 No alias (at1g15890 : 90.1) Disease resistance protein... 0.04 Orthogroups_2024-Update
MA_8325275g0010 No alias (at1g12220 : 93.2) Resistance gene, mediates resistance... 0.06 Orthogroups_2024-Update
MA_8400299g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00004005-RA No alias (at1g15890 : 219.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00004350-RA No alias (at1g12220 : 109.0) Resistance gene, mediates resistance... 0.03 Orthogroups_2024-Update
PSME_00004450-RA No alias (at4g10780 : 156.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00025470-RA No alias (at1g12220 : 208.0) Resistance gene, mediates resistance... 0.04 Orthogroups_2024-Update
PSME_00026738-RA No alias (at1g61180 : 216.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00027915-RA No alias (at1g15890 : 191.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00045398-RA No alias (at1g12280 : 140.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
PSME_00045900-RA No alias (at1g12220 : 213.0) Resistance gene, mediates resistance... 0.04 Orthogroups_2024-Update
PSME_00046780-RA No alias (at4g10780 : 218.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00053148-RA No alias (at1g12210 : 218.0) RFL1 has high sequence similarity to... 0.03 Orthogroups_2024-Update
PSME_00056885-RA No alias (at4g27220 : 223.0) NB-ARC domain-containing disease... 0.03 Orthogroups_2024-Update
Potri.001G313301 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G124100 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T003800 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T013900 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T024900 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Potri.T025650 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T026800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T027300 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T044500 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.T044800 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T045200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 5 106
No external refs found!