1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_5353g0010

MA_5353g0010


Description : (q03684|bip4_tobac : 1098.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (at5g28540 : 1087.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (reliability: 2174.0) & (original description: no original description)


Gene families : OG_42_0000096 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_5353g0010
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
A4A49_43302 No alias heat shock cognate 70 kda protein 2 0.02 Orthogroups_2024-Update
At5g28540 No alias Mediator of RNA polymerase II transcription subunit 37a... 0.03 Orthogroups_2024-Update
Cre02.g080700 No alias Heat shock protein 70 (Hsp 70) family protein 0.01 Orthogroups_2024-Update
Cre06.g250100 No alias chloroplast heat shock protein 70-2 0.01 Orthogroups_2024-Update
HORVU1Hr1G030790.1 No alias chaperone *(cpHsc70)) 0.03 Orthogroups_2024-Update
Kfl00416_0100 kfl00416_0100_v1.1 (q03684|bip4_tobac : 984.0) Luminal-binding protein 4... 0.04 Orthogroups_2024-Update
Kfl00430_0080 kfl00430_0080_v1.... (p09189|hsp7c_pethy : 1031.0) Heat shock cognate 70 kDa... 0.01 Orthogroups_2024-Update
Kfl00440_0020 kfl00440_0020_v1.1 (at4g24280 : 902.0) Involved in protein import into ... 0.01 Orthogroups_2024-Update
Kfl00460_0030 kfl00460_0030_v1.1 (q02028|hsp7s_pea : 999.0) Stromal 70 kDa heat... 0.01 Orthogroups_2024-Update
MA_53567g0010 No alias (p09189|hsp7c_pethy : 878.0) Heat shock cognate 70 kDa... 0.04 Orthogroups_2024-Update
Potri.008G054600 No alias heat shock cognate protein 70-1 0.03 Orthogroups_2024-Update
Pp1s153_153V6 No alias heat shock 0.02 Orthogroups_2024-Update
Pp1s181_3V6 No alias luminal binding protein 0.02 Orthogroups_2024-Update
Seita.1G117600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.2G255900.1 No alias chaperone HSCA of mitochondrial ISC system transfer... 0.02 Orthogroups_2024-Update
Seita.3G327900.1 No alias chaperone *(Hsp70) 0.04 Orthogroups_2024-Update
Sobic.004G011700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g082920 No alias Heat shock protein 70 (AHRD V3.3 *** Q9M4E8_CUCSA) 0.03 Orthogroups_2024-Update
Solyc08g082820 No alias TOMBIPGRBC Tomato BiP (binding protein)/grp78 0.02 Orthogroups_2024-Update
Sopen08g031050 No alias Hsp70 protein 0.02 Orthogroups_2024-Update
evm.model.contig_2140.3 No alias (p09189|hsp7c_pethy : 883.0) Heat shock cognate 70 kDa... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 38 645
No external refs found!