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  5. Solyc10g079420

Solyc10g079420


Description : Calcium-binding EF-hand (AHRD V3.3 *** A0A103XQG1_CYNCS)


Gene families : OG_42_0007947 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g079420
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
At2g41410 No alias Probable calcium-binding protein CML35... 0.03 Orthogroups_2024-Update
Brara.D02525.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
LOC_Os11g04560 No alias calmodulin-like protein 1, putative, expressed 0.03 Orthogroups_2024-Update
Seita.7G316900.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Solyc04g018110 No alias Hop-interacting protein THI026 (AHRD V3.3 *** G8Z256_SOLLC) 0.03 Orthogroups_2024-Update
Sopen10g030390 No alias EF hand 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 67 124
IPR002048 EF_hand_dom 138 201
No external refs found!