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  5. Solyc10g079490

Solyc10g079490


Description : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** A0A061F0L4_THECC)


Gene families : OG_42_0000216 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc10g079490
Cluster HCCA clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
A4A49_13111 No alias beta-glucuronosyltransferase glcat14a 0.06 Orthogroups_2024-Update
AC208327.4_FG006 No alias Core-2/I-branching... 0.02 Orthogroups_2024-Update
GRMZM2G018869 No alias Core-2/I-branching... 0.05 Orthogroups_2024-Update
Glyma.08G068500 No alias Core-2/I-branching... 0.04 Orthogroups_2024-Update
LOC_Os08g04790 No alias xylosyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G263000 No alias Core-2/I-branching... 0.02 Orthogroups_2024-Update
Pp1s149_88V6 No alias MYH19.150; N-acetylglucosaminyltransferase family... 0.02 Orthogroups_2024-Update
Seita.3G036100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G142500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen10g030130 No alias Core-2/I-Branching enzyme 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 54 312
No external refs found!