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  5. Solyc10g079520

Solyc10g079520


Description : LOW QUALITY:transmembrane protein, putative (DUF247) (AHRD V3.3 *** AT3G50170.1)


Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g079520
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
At4g31980 No alias PPPDE thiol peptidase family protein... 0.03 Orthogroups_2024-Update
Bradi3g41560 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Bradi3g57350 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Glyma.03G027000 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
HORVU2Hr1G020920.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_749769g0010 No alias (at3g50120 : 80.9) Plant protein of unknown function... 0.02 Orthogroups_2024-Update
Potri.003G208700 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.013G146400 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.016G040100 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.T087400 No alias Function unknown 0.02 Orthogroups_2024-Update
Sopen04g004110 No alias Plant protein of unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 71 504
No external refs found!