MA_561217g0010

Description : (at5g65360 : 228.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p68428|h32_wheat : 226.0) Histone H3.2 - Triticum aestivum (Wheat) & (reliability: 456.0) & (original description: no original description)

Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_561217g0010
Cluster	HCCA clusters: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g49997	No alias	Histone superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g27720	No alias	Histone superfamily protein	0.04	Orthogroups_2024-Update
Brara.B00354.1	No alias	histone *(H3)	0.02	Orthogroups_2024-Update
Brara.B03430.1	No alias	histone *(H3)	0.02	Orthogroups_2024-Update
Brara.C00416.1	No alias	histone *(H3)	0.02	Orthogroups_2024-Update
Brara.D00649.1	No alias	histone *(H3)	0.03	Orthogroups_2024-Update
Brara.I01745.1	No alias	histone *(H3)	0.03	Orthogroups_2024-Update
Cre06.g264650	No alias	Histone superfamily protein	0.02	Orthogroups_2024-Update
Cre06.g274000	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Cre06.g276850	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Cre12.g504650	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Cre12.g506300	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Cre12.g506500	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Cre13.g569950	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Cre17.g708150	No alias	Histone superfamily protein	0.04	Orthogroups_2024-Update
Cre17.g708700	No alias	Histone superfamily protein	0.02	Orthogroups_2024-Update
Cre17.g709050	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G130079	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G355773	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G188700	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G202500	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G245000	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G130900	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G342000	No alias	Histone superfamily protein	0.02	Orthogroups_2024-Update
Glyma.18G266200	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G012820.2	No alias	histone *(H3)	0.02	Orthogroups_2024-Update
Potri.001G016700	No alias	Histone superfamily protein	0.04	Orthogroups_2024-Update
Potri.002G028800	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Potri.T159501	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Seita.7G095500.1	No alias	histone *(H3)	0.03	Orthogroups_2024-Update
Solyc01g079110	No alias	Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH)	0.03	Orthogroups_2024-Update
Solyc01g080600	No alias	Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA)	0.03	Orthogroups_2024-Update
Solyc01g086820	No alias	Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA)	0.03	Orthogroups_2024-Update
Solyc04g074580	No alias	Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE)	0.02	Orthogroups_2024-Update
Solyc12g056540	No alias	Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC)	0.02	Orthogroups_2024-Update
Sopen01g033540	No alias	Core histone H2A/H2B/H3/H4	0.04	Orthogroups_2024-Update
Sopen12g029140	No alias	Core histone H2A/H2B/H3/H4	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
MF	GO:0050661	NADP binding	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	40	171

External Links

No external refs found!

MA_561217g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation