MA_56828g0010

Description : (at5g02460 : 145.0) Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 (TAIR:AT2G37590.1); Has 1212 Blast hits to 1182 proteins in 84 species: Archae - 0; Bacteria - 4; Metazoa - 69; Fungi - 10; Plants - 1097; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (o24463|pbf_maize : 124.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 290.0) & (original description: no original description)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_56828g0010
Cluster	HCCA clusters: Cluster_203

Target	Alias	Description	ECC score	Gene Family Method
At5g65590	No alias	SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]	0.03	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
Bradi3g29940	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
Brara.I02909.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.J01378.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
GRMZM2G089949	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
GRMZM2G146283	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
GRMZM2G179069	No alias	OBF-binding protein 3	0.05	Orthogroups_2024-Update
Glyma.08G228900	No alias	cycling DOF factor 1	0.04	Orthogroups_2024-Update
PSME_00020524-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.04	Orthogroups_2024-Update
Solyc02g090310	No alias	Dof zinc finger protein (AHRD V3.3 - W9QGW0_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g076030	No alias	Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU)	0.03	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
MF	GO:0016597	amino acid binding	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Predicted GO
MF	GO:0031406	carboxylic acid binding	IEP	Predicted GO
MF	GO:0043177	organic acid binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	44	100

External Links

No external refs found!

MA_56828g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation