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  5. MA_577g0010

MA_577g0010


Description : (at1g32230 : 276.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description)


Gene families : OG_42_0000647 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_577g0010
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Bradi1g63360 No alias WWE protein-protein interaction domain protein family 0.06 Orthogroups_2024-Update
PSME_00015730-RA No alias (at1g32230 : 169.0) Encodes a protein belonging to the... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022003 RST 547 611
IPR012317 Poly(ADP-ribose)pol_cat_dom 340 433
IPR004170 WWE-dom 90 147
No external refs found!