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  5. MA_58978g0010

MA_58978g0010


Description : (q9m5x7|nltp_maldo : 107.0) Nonspecific lipid-transfer protein precursor (LTP) (Allergen Mal d 3) - Malus domestica (Apple) (Malus sylvestris) & (at5g59310 : 105.0) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 4 (LTP4); FUNCTIONS IN: lipid binding; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus, lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)


Gene families : OG_42_0000142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_58978g0010
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
A4A49_18039 No alias non-specific lipid-transfer protein ap10 0.03 Orthogroups_2024-Update
At5g01870 No alias Non-specific lipid-transfer protein... 0.03 Orthogroups_2024-Update
Bradi4g44410 No alias lipid transfer protein 1 0.02 Orthogroups_2024-Update
Brara.B01105.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C04371.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00677.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E03138.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G130100 No alias lipid transfer protein 1 0.03 Orthogroups_2024-Update
Glyma.01G132600 No alias lipid transfer protein 1 0.03 Orthogroups_2024-Update
Glyma.08G161700 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Glyma.09G275500 No alias lipid transfer protein 3 0.02 Orthogroups_2024-Update
LOC_Os03g59380 No alias LTPL28 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
PSME_00024120-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.011G022200 No alias lipid transfer protein 12 0.03 Orthogroups_2024-Update
Potri.014G046500 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Orthogroups_2024-Update
Potri.016G135800 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Solyc06g005770 No alias Non-specific lipid-transfer protein (AHRD V3.3 *** K4C359_SOLLC) 0.02 Orthogroups_2024-Update
Solyc08g067540 No alias Non-specific lipid-transfer protein (AHRD V3.3 *** K4CLY0_SOLLC) 0.03 Orthogroups_2024-Update
Solyc10g075150 No alias Non-specific lipid-transfer protein (AHRD V3.3 *** M1AVB3_SOLTU) 0.04 Orthogroups_2024-Update
Sopen08g021460 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 37 122
No external refs found!