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  5. MA_593637g0010

MA_593637g0010


Description : (at1g28190 : 92.8) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits to 162 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description)


Gene families : OG_42_0001181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_593637g0010
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G022800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g72360 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os05g31970 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_218732g0010 No alias (at1g28190 : 109.0) unknown protein; BEST Arabidopsis... 0.05 Orthogroups_2024-Update
MA_8819g0010 No alias (at1g28190 : 115.0) unknown protein; BEST Arabidopsis... 0.03 Orthogroups_2024-Update
Sobic.003G428700.2 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 111
No external refs found!