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  5. MA_606673g0010

MA_606673g0010


Description : (at5g22870 : 101.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G08160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 183.4) & (original description: no original description)


Gene families : OG_42_0000387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_606673g0010
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Bradi3g45160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Bradi5g26600 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Brara.B01436.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D00588.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D02181.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02913.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.16G017900 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
HORVU2Hr1G123370.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g33550 No alias harpin-induced protein 1 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_192947g0010 No alias (at5g53730 : 138.0) Late embryogenesis abundant (LEA)... 0.04 Orthogroups_2024-Update
MA_7708687g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00036679-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00044088-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.002G180000 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Orthogroups_2024-Update
Potri.012G006000 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 59 160
No external refs found!