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  5. MA_6149868g0010

MA_6149868g0010


Description : (at2g36710 : 275.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G36700.1); Has 6628 Blast hits to 4257 proteins in 552 species: Archae - 11; Bacteria - 922; Metazoa - 2127; Fungi - 511; Plants - 1794; Viruses - 17; Other Eukaryotes - 1246 (source: NCBI BLink). & (p83218|pme_dauca : 169.0) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE) - Daucus carota (Carrot) & (reliability: 550.0) & (original description: no original description)


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_6149868g0010
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
A4A49_00880 No alias pectinesterase qrt1 0.03 Orthogroups_2024-Update
At2g21610 No alias Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] 0.03 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.03 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.03 Orthogroups_2024-Update
Brara.A02274.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.B00244.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I00335.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.J02514.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.01G066000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G066100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G035100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G032700 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G060900 No alias pectin methylesterase 31 0.03 Orthogroups_2024-Update
Glyma.13G113700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G025500 No alias pectin methylesterase 31 0.02 Orthogroups_2024-Update
LOC_Os07g46190 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_99816g0010 No alias (at2g36710 : 325.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
Potri.001G364200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G120100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G117100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s215_36V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s67_89V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Sopen12g003480 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 2 292
No external refs found!