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Description : (at2g13600 : 466.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 135.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 932.0) & (original description: no original description)
Gene families : OG_42_0015012 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0015012_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_61894g0010 | |
| Cluster | HCCA clusters: Cluster_156 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Kfl00131_0190 | kfl00131_0190_v1.1 | (at2g31400 : 177.0) Encodes a a chloroplast-localized... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 520 | 544 |
| IPR002885 | Pentatricopeptide_repeat | 319 | 344 |
| IPR002885 | Pentatricopeptide_repeat | 113 | 137 |
| IPR002885 | Pentatricopeptide_repeat | 586 | 615 |
| IPR002885 | Pentatricopeptide_repeat | 139 | 186 |
| IPR002885 | Pentatricopeptide_repeat | 345 | 392 |
| IPR002885 | Pentatricopeptide_repeat | 243 | 288 |
| IPR002885 | Pentatricopeptide_repeat | 445 | 494 |
| No external refs found! |