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  5. MA_61945g0010

MA_61945g0010


Description : (q40636|expa2_orysa : 398.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (at2g03090 : 393.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A15 (EXPA15); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 786.0) & (original description: no original description)


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_61945g0010
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
A4A49_26925 No alias expansin-a10 0.04 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.03 Orthogroups_2024-Update
Brara.I01201.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Glyma.05G025600 No alias expansin A1 0.02 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.03 Orthogroups_2024-Update
Kfl00857_0040 kfl00857_0040_v1.1 (at1g12560 : 155.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
LOC_Os03g06000 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g15840 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g39990 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_100868g0010 No alias (at2g40610 : 292.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
MA_172610g0010 No alias (at2g40610 : 331.0) member of Alpha-Expansin Gene... 0.06 Orthogroups_2024-Update
MA_30127g0010 No alias (at2g40610 : 411.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
MA_40314g0010 No alias (q40636|expa2_orysa : 396.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
MA_86877g0010 No alias (at1g69530 : 387.0) Member of Alpha-Expansin Gene... 0.05 Orthogroups_2024-Update
Mp1g22730.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Mp3g10160.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
PSME_00008183-RA No alias (at1g69530 : 380.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00050683-RA No alias (q40636|expa2_orysa : 396.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
PSME_00051669-RA No alias (at2g40610 : 425.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Seita.9G342900.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc06g076220 No alias expansin18 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 121 205
IPR007117 Expansin_CBD 217 293
No external refs found!