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Description : (at5g60530 : 265.0) late embryogenesis abundant protein-related / LEA protein-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G60520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)
Gene families : OG_42_0000359 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_61955g0010 | |
| Cluster | HCCA clusters: Cluster_165 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi4g36267 | No alias | late embryogenesis abundant protein-related / LEA protein-related | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g33520 | No alias | RCLEA6 - Root cap and Late embryogenesis related family... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g47940 | No alias | RCLEA8 - Root cap and Late embryogenesis related family... | 0.02 | Orthogroups_2024-Update | |
| Mp3g16530.1 | No alias | no hits & (original description: none) | 0.02 | Orthogroups_2024-Update | |
| Mpzg00310.1 | No alias | no hits & (original description: none) | 0.02 | Orthogroups_2024-Update | |
| PSME_00000795-RA | No alias | (at5g60530 : 352.0) late embryogenesis abundant... | 0.03 | Orthogroups_2024-Update | |
| Seita.7G089400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sopen07g031670 | No alias | Root cap | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| CC | GO:0030286 | dynein complex | IEP | Predicted GO |
| CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009646 | Root_cap | 230 | 283 |
| No external refs found! |