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  5. MA_6558g0010

MA_6558g0010


Description : (at5g01930 : 532.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1064.0) & (original description: no original description)


Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_6558g0010
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
At5g01930 No alias Mannan endo-1,4-beta-mannosidase 6... 0.03 Orthogroups_2024-Update
HORVU3Hr1G071210.1 No alias endo-beta-1,4-mannanase 0.03 Orthogroups_2024-Update
PSME_00047131-RA No alias (at5g66460 : 457.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Potri.005G120500 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Pp1s41_160V6 No alias hydrolyzing o-glycosyl 0.02 Orthogroups_2024-Update
Seita.8G012300.1 No alias endo-beta-1,4-mannanase 0.02 Orthogroups_2024-Update
Sobic.001G066900.1 No alias endo-beta-1,4-mannanase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 12 313
No external refs found!