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Description : (at1g05670 : 286.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 263.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: no original description)
Gene families : OG_42_0011171 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011171_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_68479g0030 | |
| Cluster | HCCA clusters: Cluster_195 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 29 | 76 |
| IPR002885 | Pentatricopeptide_repeat | 304 | 353 |
| IPR002885 | Pentatricopeptide_repeat | 234 | 283 |
| IPR002885 | Pentatricopeptide_repeat | 164 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 2 | 25 |
| IPR002885 | Pentatricopeptide_repeat | 371 | 397 |
| IPR002885 | Pentatricopeptide_repeat | 125 | 157 |
| IPR002885 | Pentatricopeptide_repeat | 93 | 116 |
| No external refs found! |