Description : (at1g49230 : 137.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink). & (q9lrb7|el5_orysa : 84.0) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 274.0) & (original description: no original description)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_69343g0010 | |
Cluster | HCCA clusters: Cluster_98 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_18116 | No alias | ring-h2 finger protein atl78 | 0.03 | Orthogroups_2024-Update | |
A4A49_20151 | No alias | putative ring-h2 finger protein atl61 | 0.03 | Orthogroups_2024-Update | |
A4A49_27114 | No alias | ring-h2 finger protein atl54 | 0.03 | Orthogroups_2024-Update | |
A4A49_29026 | No alias | ring-h2 finger protein atl60 | 0.02 | Orthogroups_2024-Update | |
A4A49_42691 | No alias | ring-h2 finger protein atl7 | 0.02 | Orthogroups_2024-Update | |
At4g35480 | No alias | RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] | 0.03 | Orthogroups_2024-Update | |
Bradi3g60770 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi5g19490 | No alias | RING-H2 finger A3A | 0.03 | Orthogroups_2024-Update | |
Brara.A03736.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.C03025.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.D02285.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.E00038.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.G03117.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
GRMZM2G386584 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G460958 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.03G239900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G205600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.12G082550 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.14G178400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.15G157400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.16G014600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.17G028400 | No alias | TOXICOS EN LEVADURA 2 | 0.05 | Orthogroups_2024-Update | |
Glyma.19G010400 | No alias | hypoxia-responsive family protein / zinc finger... | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G082030.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU3Hr1G028260.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G028280.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G087860.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g11520 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_10436650g0010 | No alias | (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... | 0.04 | Orthogroups_2024-Update | |
MA_3380g0010 | No alias | (at1g49230 : 140.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_9143538g0010 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
MA_98187g0010 | No alias | (at1g72200 : 119.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00003023-RA | No alias | (at1g72200 : 141.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00022170-RA | No alias | (at1g53820 : 134.0) RING/U-box superfamily protein;... | 0.05 | Orthogroups_2024-Update | |
PSME_00024216-RA | No alias | (at1g49230 : 130.0) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
PSME_00034763-RA | No alias | (at5g05280 : 85.1) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
PSME_00054622-RA | No alias | (at1g49230 : 106.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
PSME_00057213-RA | No alias | (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... | 0.04 | Orthogroups_2024-Update | |
Potri.003G073300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.003G075200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.005G036800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.007G111900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.008G219200 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Orthogroups_2024-Update | |
Potri.009G110000 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.012G003900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s257_3V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.04 | Orthogroups_2024-Update | |
Pp1s85_173V6 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
Seita.1G197500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.2G390800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.7G218600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G187600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.009G110400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.009G110500.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
Solyc01g105610 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
Solyc02g086950 | No alias | LOW QUALITY:RING/U-box superfamily protein, putative... | 0.03 | Orthogroups_2024-Update | |
Solyc03g032060 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) | 0.03 | Orthogroups_2024-Update | |
Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.03 | Orthogroups_2024-Update | |
Sopen02g012490 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen03g031440 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen08g025350 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen11g001290 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
BP | GO:0000723 | telomere maintenance | IEP | Predicted GO |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predicted GO |
MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006996 | organelle organization | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
MF | GO:0010333 | terpene synthase activity | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0016829 | lyase activity | IEP | Predicted GO |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Predicted GO |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
MF | GO:0019900 | kinase binding | IEP | Predicted GO |
MF | GO:0019901 | protein kinase binding | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
BP | GO:0032200 | telomere organization | IEP | Predicted GO |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
BP | GO:0036211 | protein modification process | IEP | Predicted GO |
BP | GO:0042325 | regulation of phosphorylation | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
BP | GO:0043549 | regulation of kinase activity | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0045859 | regulation of protein kinase activity | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Predicted GO |
BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
BP | GO:0051338 | regulation of transferase activity | IEP | Predicted GO |
BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
BP | GO:0060249 | anatomical structure homeostasis | IEP | Predicted GO |
BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 115 | 158 |
No external refs found! |