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- MA_70355g0010
MA_70355g0010
Description : (at1g24450 : 108.0) NUCLEAR FUSION DEFECTIVE 2 (NFD2); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); Has 2124 Blast hits to 2124 proteins in 820 species: Archae - 3; Bacteria - 1583; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)
Gene families : OG_42_0009873 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009873_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type Description Actions Neighborhood Picea release: MA_70355g0010 Cluster HCCA clusters: Cluster_191
Functional Annotation
Type GO Term Name Evidence Source MF GO:0003674 molecular_function None Extended MF GO:0003824 catalytic activity None Extended MF GO:0004518 nuclease activity None Extended MF GO:0004519 endonuclease activity None Extended MF GO:0004521 endoribonuclease activity None Extended MF GO:0004525 ribonuclease III activity IEA InterProScan predictions MF GO:0004540 ribonuclease activity None Extended BP GO:0006139 nucleobase-containing compound metabolic process None Extended BP GO:0006396 RNA processing IEA InterProScan predictions BP GO:0006725 cellular aromatic compound metabolic process None Extended BP GO:0006807 nitrogen compound metabolic process None Extended BP GO:0008150 biological_process None Extended BP GO:0008152 metabolic process None Extended BP GO:0009987 cellular process None Extended BP GO:0016070 RNA metabolic process None Extended MF GO:0016787 hydrolase activity None Extended MF GO:0016788 hydrolase activity, acting on ester bonds None Extended MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters None Extended MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters None Extended MF GO:0032296 double-stranded RNA-specific ribonuclease activity None Extended BP GO:0034641 cellular nitrogen compound metabolic process None Extended BP GO:0043170 macromolecule metabolic process None Extended BP GO:0044237 cellular metabolic process None Extended BP GO:0044238 primary metabolic process None Extended BP GO:0046483 heterocycle metabolic process None Extended BP GO:0071704 organic substance metabolic process None Extended BP GO:0090304 nucleic acid metabolic process None Extended MF GO:0140098 catalytic activity, acting on RNA None Extended BP GO:1901360 organic cyclic compound metabolic process None Extended Type GO Term Name Evidence Source BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO MF GO:0003779 actin binding IEP Predicted GO MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO CC GO:0005575 cellular_component IEP Predicted GO CC GO:0005576 extracellular region IEP Predicted GO CC GO:0005618 cell wall IEP Predicted GO CC GO:0005622 intracellular IEP Predicted GO CC GO:0005795 Golgi stack IEP Predicted GO CC GO:0005839 proteasome core complex IEP Predicted GO BP GO:0005975 carbohydrate metabolic process IEP Predicted GO BP GO:0005976 polysaccharide metabolic process IEP Predicted GO BP GO:0006073 cellular glucan metabolic process IEP Predicted GO BP GO:0006508 proteolysis IEP Predicted GO MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO MF GO:0008233 peptidase activity IEP Predicted GO MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO BP GO:0009058 biosynthetic process IEP Predicted GO BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO BP GO:0009250 glucan biosynthetic process IEP Predicted GO BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO BP GO:0010215 cellulose microfibril organization IEP Predicted GO CC GO:0016021 integral component of membrane IEP Predicted GO BP GO:0016049 cell growth IEP Predicted GO BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO MF GO:0016759 cellulose synthase activity IEP Predicted GO MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO BP GO:0030198 extracellular matrix organization IEP Predicted GO BP GO:0030243 cellulose metabolic process IEP Predicted GO BP GO:0030244 cellulose biosynthetic process IEP Predicted GO CC GO:0030312 external encapsulating structure IEP Predicted GO CC GO:0031224 intrinsic component of membrane IEP Predicted GO CC GO:0031225 anchored component of membrane IEP Predicted GO CC GO:0031984 organelle subcompartment IEP Predicted GO BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO BP GO:0040007 growth IEP Predicted GO BP GO:0043062 extracellular structure organization IEP Predicted GO BP GO:0044042 glucan metabolic process IEP Predicted GO BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO CC GO:0044425 membrane part IEP Predicted GO CC GO:0044431 Golgi apparatus part IEP Predicted GO CC GO:0044464 cell part IEP Predicted GO MF GO:0046527 glucosyltransferase activity IEP Predicted GO CC GO:0048046 apoplast IEP Predicted GO BP GO:0051273 beta-glucan metabolic process IEP Predicted GO BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO MF GO:0070003 threonine-type peptidase activity IEP Predicted GO MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO CC GO:0098791 Golgi subcompartment IEP Predicted GO MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO BP GO:1901576 organic substance biosynthetic process IEP Predicted GO InterPro domains Description Start Stop IPR000999 RNase_III_dom 53 164 External LinksNo external refs found! 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