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  5. MA_711804g0010

MA_711804g0010


Description : (at3g43430 : 92.4) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G20885.1); Has 6030 Blast hits to 6013 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 1395; Fungi - 381; Plants - 3597; Viruses - 16; Other Eukaryotes - 641 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description)


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_711804g0010
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Bradi5g19180 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
Brara.C02915.1 No alias E3 ubiquitin ligase *(BRH) 0.02 Orthogroups_2024-Update
Brara.G00433.1 No alias E3 ubiquitin ligase *(XERICO) 0.04 Orthogroups_2024-Update
GRMZM2G134023 No alias brassinosteroid-responsive RING-H2 0.02 Orthogroups_2024-Update
Glyma.05G182000 No alias RING-H2 finger A2A 0.03 Orthogroups_2024-Update
HORVU1Hr1G036510.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G066850.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G067200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g38460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_130176g0010 No alias (at5g20885 : 80.5) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_169947g0010 No alias (at3g61460 : 156.0) Encodes a novel ring finger protein... 0.03 Orthogroups_2024-Update
Potri.005G081200 No alias RING-H2 finger A2A 0.04 Orthogroups_2024-Update
Seita.1G273100.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Sobic.004G280900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G281400.1 No alias E3 ubiquitin ligase *(BRH) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 87 130
No external refs found!