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  5. MA_713159g0010

MA_713159g0010


Description : (at5g59970 : 161.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 161.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 322.0) & (original description: no original description)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_713159g0010
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AC212565.3_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
AC233865.1_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g37338 No alias Function unknown 0.04 Orthogroups_2024-Update
Bradi5g19350 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G421279 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G098320.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
MA_141877g0030 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
MA_38882g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!