Description : (at1g11290 : 611.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1222.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_724726g0010 | |
Cluster | HCCA clusters: Cluster_227 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
124407 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
27025 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
412514 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi1g14160 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi1g72290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi2g04723 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g09441 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g40131 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi4g20810 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Brara.A00314.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
Brara.E03135.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Glyma.02G160400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G061610.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G032070.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G064880.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G047290.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
MA_18165g0010 | No alias | (at3g12770 : 580.0) Encodes a pentatricopeptide repeat... | 0.04 | Orthogroups_2024-Update | |
PSME_00001942-RA | No alias | (at3g57430 : 689.0) Encodes a chloroplast RNA editing... | 0.04 | Orthogroups_2024-Update | |
PSME_00002349-RA | No alias | (at3g12770 : 612.0) Encodes a pentatricopeptide repeat... | 0.04 | Orthogroups_2024-Update | |
PSME_00005130-RA | No alias | (at4g33990 : 552.0) embryo defective 2758 (EMB2758);... | 0.05 | Orthogroups_2024-Update | |
PSME_00010400-RA | No alias | (at4g02750 : 490.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
PSME_00025245-RA | No alias | (at3g03580 : 656.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
PSME_00031955-RA | No alias | (at1g11290 : 710.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
PSME_00041541-RA | No alias | (at3g12770 : 598.0) Encodes a pentatricopeptide repeat... | 0.04 | Orthogroups_2024-Update | |
PSME_00056153-RA | No alias | (at2g13600 : 519.0) Pentatricopeptide repeat (PPR)... | 0.05 | Orthogroups_2024-Update | |
PSME_00056965-RA | No alias | (at4g39530 : 592.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
Potri.001G186500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.013G152000 | No alias | mitochondrial editing factor 22 | 0.02 | Orthogroups_2024-Update | |
Potri.016G053500 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
Seita.1G205700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.1G290500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.3G224300.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.4G225800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.03 | Orthogroups_2024-Update | |
Seita.8G017200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.001G282300.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.002G292300.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
Sobic.004G053100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G141600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.004G290400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.006G146900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.008G009000.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.02 | Orthogroups_2024-Update | |
Sobic.010G232700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.010G258600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Solyc10g008570 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen09g031050 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
No external refs found! |