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  5. MA_73895g0010

MA_73895g0010


Description : (at2g27610 : 543.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (q76c99|rf1_orysa : 135.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1086.0) & (original description: no original description)


Gene families : OG_42_0011959 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011959_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_73895g0010
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Bradi2g62030 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
PSME_00029634-RA No alias (at4g33170 : 463.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 115 162
IPR002885 Pentatricopeptide_repeat 14 61
IPR002885 Pentatricopeptide_repeat 317 364
IPR002885 Pentatricopeptide_repeat 418 465
IPR032867 DYW_dom 591 663
IPR002885 Pentatricopeptide_repeat 218 244
IPR002885 Pentatricopeptide_repeat 190 217
No external refs found!