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  5. MA_755187g0010

MA_755187g0010


Description : (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 128.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1076.0) & (original description: no original description)


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_755187g0010
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Bradi1g05610 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g54927 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G078900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G049100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G009930.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G040610.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g08120 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g40750 No alias pentatricopeptide domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g43470 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g25280 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g30760 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00016877-RA No alias (at4g13650 : 622.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00020124-RA No alias (at5g09950 : 677.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update
Seita.1G290500.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc09g092150 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Sopen10g006390 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 494 618
IPR002885 Pentatricopeptide_repeat 220 267
IPR002885 Pentatricopeptide_repeat 320 368
IPR002885 Pentatricopeptide_repeat 153 202
IPR002885 Pentatricopeptide_repeat 54 101
IPR002885 Pentatricopeptide_repeat 21 52
IPR002885 Pentatricopeptide_repeat 395 417
No external refs found!