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  5. Solyc10g083260

Solyc10g083260


Description : LOW QUALITY:senescence regulator (Protein of unknown function, DUF584) (AHRD V3.3 *-* AT3G15040.1)


Gene families : OG_42_0000208 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g083260
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
A4A49_26847 No alias hypothetical protein 0.04 Orthogroups_2024-Update
AC205471.4_FG007 No alias Protein of unknown function, DUF584 0.03 Orthogroups_2024-Update
At5g60680 No alias Emb [Source:UniProtKB/TrEMBL;Acc:Q9FF51] 0.03 Orthogroups_2024-Update
Brara.A01218.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C03553.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01698.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I02211.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.13G325800 No alias Protein of unknown function, DUF584 0.03 Orthogroups_2024-Update
Glyma.15G089600 No alias Protein of unknown function, DUF584 0.04 Orthogroups_2024-Update
Glyma.18G095800 No alias Protein of unknown function, DUF584 0.04 Orthogroups_2024-Update
LOC_Os07g33270 No alias DUF584 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_431548g0010 No alias (at4g21970 : 103.0) Protein of unknown function, DUF584;... 0.03 Orthogroups_2024-Update
MA_441447g0010 No alias (at4g21970 : 110.0) Protein of unknown function, DUF584;... 0.04 Orthogroups_2024-Update
MA_63850g0010 No alias (at4g04630 : 114.0) Protein of unknown function, DUF584;... 0.05 Orthogroups_2024-Update
Potri.016G076300 No alias Protein of unknown function, DUF584 0.03 Orthogroups_2024-Update
Pp1s363_26V6 No alias F4H6.15; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G331700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc07g064650 No alias senescence regulator (Protein of unknown function,... 0.03 Orthogroups_2024-Update
Solyc09g010140 No alias Senescence regulator (AHRD V3.3 *** A0A103Y6R7_CYNCS) 0.03 Orthogroups_2024-Update
Solyc11g069450 No alias LOW QUALITY:Senescence regulator (AHRD V3.3 *** A0A103XHC6_CYNCS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 12 74
No external refs found!