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  5. MA_75934g0010

MA_75934g0010


Description : (at3g13770 : 540.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 37890 Blast hits to 13461 proteins in 236 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 51; Plants - 37361; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (q76c99|rf1_orysa : 109.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1012.0) & (original description: no original description)


Gene families : OG_42_0022451 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_75934g0010
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
PSME_00031609-RA No alias (at3g13770 : 549.0) Pentatricopeptide repeat (PPR)... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 504 533
IPR002885 Pentatricopeptide_repeat 439 462
IPR002885 Pentatricopeptide_repeat 228 260
IPR032867 DYW_dom 537 661
IPR002885 Pentatricopeptide_repeat 262 310
IPR002885 Pentatricopeptide_repeat 364 411
IPR002885 Pentatricopeptide_repeat 131 178
No external refs found!