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Description : (at5g59970 : 168.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 168.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 336.0) & (original description: no original description)
Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_7644388g0010 | |
| Cluster | HCCA clusters: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 167497 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_59902 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
| Bradi2g22787 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
| Bradi2g23004 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.D02284.1 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
| Brara.F00466.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
| Brara.G01399.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
| Cre06.g264600 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g265050 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Cre06.g265200 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre06.g265450 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre06.g268000 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g268400 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Cre06.g271300 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g274150 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre06.g274300 | No alias | histone H4 | 0.04 | Orthogroups_2024-Update | |
| Cre06.g274900 | No alias | histone H4 | 0.02 | Orthogroups_2024-Update | |
| Cre06.g275700 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g276650 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre12.g504600 | No alias | histone H4 | 0.03 | Orthogroups_2024-Update | |
| Cre12.g504850 | No alias | histone H4 | 0.04 | Orthogroups_2024-Update | |
| Cre17.g709100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G146481 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G074500 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Kfl00106_g14 | kfl00106_g14_v1.1 | (at5g59970 : 160.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g38760 | No alias | Core histone H2A/H2B/H3/H4 domain containing protein,... | 0.03 | Orthogroups_2024-Update | |
| MA_116904g0010 | No alias | (at5g59970 : 162.0) Histone superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_97951g0010 | No alias | (at5g59970 : 160.0) Histone superfamily protein;... | 0.05 | Orthogroups_2024-Update | |
| Mp4g03090.1 | No alias | histone (H4) | 0.02 | Orthogroups_2024-Update | |
| Pp1s378_30V6 | No alias | histone h4 | 0.05 | Orthogroups_2024-Update | |
| Solyc05g054610 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.02 | Orthogroups_2024-Update | |
| Solyc06g072240 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.02 | Orthogroups_2024-Update | |
| Sopen06g028560 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00021357.4 | No alias | (at5g59970 : 159.0) Histone superfamily protein;... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002682 | regulation of immune system process | IEP | Predicted GO |
| BP | GO:0002831 | regulation of response to biotic stimulus | IEP | Predicted GO |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
| CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0010112 | regulation of systemic acquired resistance | IEP | Predicted GO |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
| BP | GO:0031347 | regulation of defense response | IEP | Predicted GO |
| BP | GO:0032101 | regulation of response to external stimulus | IEP | Predicted GO |
| BP | GO:0043900 | regulation of multi-organism process | IEP | Predicted GO |
| BP | GO:0045088 | regulation of innate immune response | IEP | Predicted GO |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Predicted GO |
| BP | GO:0050776 | regulation of immune response | IEP | Predicted GO |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
| BP | GO:0080134 | regulation of response to stress | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR035425 | CENP-T/H4_C | 58 | 96 |
| No external refs found! |