Description : (q7x6j9|exb17_orysa : 256.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (at2g20750 : 250.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B1 (EXPB1); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast hits to 2069 proteins in 143 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description)
Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_78155g0010 | |
Cluster | HCCA clusters: Cluster_243 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
171427 | No alias | expansin B3 | 0.03 | Orthogroups_2024-Update | |
A4A49_24520 | No alias | expansin-b15 | 0.02 | Orthogroups_2024-Update | |
At2g20750 | No alias | Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2] | 0.02 | Orthogroups_2024-Update | |
At3g60570 | No alias | Expansin-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M203] | 0.02 | Orthogroups_2024-Update | |
At4g28250 | No alias | EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] | 0.04 | Orthogroups_2024-Update | |
Bradi1g78340 | No alias | expansin B2 | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G092910.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
PSME_00003968-RA | No alias | (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... | 0.04 | Orthogroups_2024-Update | |
PSME_00015392-RA | No alias | (at2g20750 : 239.0) member of BETA-EXPANSINS. Naming... | 0.03 | Orthogroups_2024-Update | |
PSME_00024925-RA | No alias | (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... | 0.04 | Orthogroups_2024-Update | |
PSME_00039752-RA | No alias | (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... | 0.02 | Orthogroups_2024-Update | |
Pp1s100_99V6 | No alias | beta-expansin 3 | 0.04 | Orthogroups_2024-Update | |
Pp1s147_37V6 | No alias | beta-expansin 3 | 0.03 | Orthogroups_2024-Update | |
Pp1s251_59V6 | No alias | beta-expansin 3 | 0.03 | Orthogroups_2024-Update | |
Pp1s313_58V6 | No alias | beta-expansin 3 | 0.04 | Orthogroups_2024-Update | |
Pp1s313_59V6 | No alias | beta-expansin 3 | 0.03 | Orthogroups_2024-Update | |
Seita.9G157100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G294500.1 | No alias | PNP precursor polypeptide | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
MF | GO:0071949 | FAD binding | IEP | Predicted GO |
MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
No external refs found! |