1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_79409g0010

MA_79409g0010


Description : (at3g22190 : 230.0) IQ-domain 5 (IQD5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 6 (TAIR:AT2G26180.1). & (reliability: 460.0) & (original description: no original description)


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_79409g0010
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
410247 No alias IQ-domain 19 0.03 Orthogroups_2024-Update
A4A49_38184 No alias protein iq-domain 1 0.03 Orthogroups_2024-Update
At3g15050 No alias IQ-domain 10 [Source:UniProtKB/TrEMBL;Acc:Q9LKA0] 0.02 Orthogroups_2024-Update
GRMZM2G018030 No alias IQ-domain 5 0.04 Orthogroups_2024-Update
Glyma.19G179000 No alias IQ-domain 2 0.02 Orthogroups_2024-Update
Potri.011G096500 No alias IQ-domain 10 0.02 Orthogroups_2024-Update
Potri.016G086300 No alias IQ-domain 2 0.03 Orthogroups_2024-Update
Pp1s147_75V6 No alias calmodulin binding 0.03 Orthogroups_2024-Update
Pp1s272_37V6 No alias hypothetical protein similar to Arabidopsis thaliana... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 62 81
No external refs found!