Description : (at1g68510 : 183.0) LOB domain-containing protein 42 (LBD42); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 41 (TAIR:AT3G02550.1); Has 393 Blast hits to 393 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 389; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 366.0) & (original description: no original description)
Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_80122g0010 | |
Cluster | HCCA clusters: Cluster_269 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.11G049300 | No alias | LOB domain-containing protein 38 | 0.03 | Orthogroups_2024-Update | |
MA_122595g0010 | No alias | (at3g49940 : 211.0) LOB domain-containing protein 38... | 0.04 | Orthogroups_2024-Update | |
PSME_00031117-RA | No alias | (at1g67100 : 181.0) LOB domain-containing protein 40... | 0.05 | Orthogroups_2024-Update | |
Seita.3G120000.1 | No alias | AS2/LOB-type transcription factor | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004883 | LOB | 4 | 100 |
No external refs found! |