MA_8089574g0010

Description : (at2g46600 : 98.6) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 2760 Blast hits to 2760 proteins in 443 species: Archae - 0; Bacteria - 4; Metazoa - 1146; Fungi - 226; Plants - 931; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink). & (reliability: 197.2) & (original description: no original description)

Gene families : OG_42_0000762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_8089574g0010
Cluster	HCCA clusters: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18148	No alias	calcium-binding protein pbp1	0.03	Orthogroups_2024-Update
Brara.C02340.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU7Hr1G101790.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
MA_10212526g0010	No alias	(at2g46600 : 81.6) Calcium-binding EF-hand family...	0.04	Orthogroups_2024-Update
MA_10435835g0010	No alias	(at2g46600 : 85.1) Calcium-binding EF-hand family...	0.05	Orthogroups_2024-Update
MA_1552801g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_156275g0010	No alias	(at2g46600 : 132.0) Calcium-binding EF-hand family...	0.04	Orthogroups_2024-Update
MA_25900g0010	No alias	(at2g46600 : 132.0) Calcium-binding EF-hand family...	0.04	Orthogroups_2024-Update
PSME_00030209-RA	No alias	(at2g46600 : 129.0) Calcium-binding EF-hand family...	0.04	Orthogroups_2024-Update
Potri.001G411800	No alias	Calcium-binding EF-hand family protein	0.08	Orthogroups_2024-Update
Potri.011G129100	No alias	Calcium-binding EF-hand family protein	0.03	Orthogroups_2024-Update
Potri.013G151000	No alias	pinoid-binding protein 1	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006094	gluconeogenesis	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
BP	GO:0019319	hexose biosynthetic process	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	45	95

External Links

No external refs found!

MA_8089574g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation