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  5. MA_812936g0010

MA_812936g0010


Description : (at5g05390 : 539.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p14133|aso_cucsa : 182.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1078.0) & (original description: no original description)


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_812936g0010
Cluster HCCA clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
105894 No alias laccase 17 0.02 Orthogroups_2024-Update
165365 No alias Laccase/Diphenol oxidase family protein 0.01 Orthogroups_2024-Update
A4A49_00457 No alias laccase-3 0.02 Orthogroups_2024-Update
A4A49_05486 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_13107 No alias laccase-14 0.03 Orthogroups_2024-Update
A4A49_21564 No alias laccase-15 0.03 Orthogroups_2024-Update
A4A49_34983 No alias laccase-4 0.02 Orthogroups_2024-Update
At3g09220 No alias Laccase-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR40] 0.03 Orthogroups_2024-Update
At5g05390 No alias Laccase-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB5] 0.03 Orthogroups_2024-Update
Bradi1g66720 No alias laccase 17 0.03 Orthogroups_2024-Update
Brara.D02326.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Brara.H02436.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
GRMZM2G336337 No alias laccase 12 0.02 Orthogroups_2024-Update
Glyma.01G108200 No alias laccase 7 0.02 Orthogroups_2024-Update
LOC_Os01g62480 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g38420 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433807g0010 No alias (q40588|aso_tobac : 375.0) L-ascorbate oxidase precursor... 0.03 Orthogroups_2024-Update
MA_28768g0010 No alias (at2g38080 : 580.0) Encodes a protein with similarity to... 0.04 Orthogroups_2024-Update
MA_811078g0010 No alias (at5g05390 : 660.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
Mp3g20310.1 No alias Laccase-2 OS=Oryza sativa subsp. japonica... 0.01 Orthogroups_2024-Update
PSME_00026986-RA No alias (at5g05390 : 621.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00031239-RA No alias (at1g18140 : 634.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00043959-RA No alias (at5g03260 : 782.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Pp1s17_180V6 No alias laccase 90c 0.02 Orthogroups_2024-Update
Seita.1G320800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.01 Orthogroups_2024-Update
Seita.7G330200.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Sobic.003G352700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
Solyc06g076330 No alias Laccase (AHRD V3.3 *** M1CZK5_SOLTU) 0.02 Orthogroups_2024-Update
Solyc12g056820 No alias Laccase (AHRD V3.3 *** A0A022RU64_ERYGU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 437 530
IPR001117 Cu-oxidase 185 332
IPR011707 Cu-oxidase_3 5 118
No external refs found!