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  5. MA_81710g0010

MA_81710g0010


Description : (at2g45680 : 125.0) TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G51910.2); Has 1218 Blast hits to 581 proteins in 105 species: Archae - 0; Bacteria - 18; Metazoa - 103; Fungi - 60; Plants - 391; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_81710g0010
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
A4A49_19852 No alias transcription factor tcp19 0.03 Orthogroups_2024-Update
Bradi4g35670 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Brara.C00343.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Potri.T044100 No alias TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 35 115
No external refs found!