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  5. MA_8334627g0010

MA_8334627g0010


Description : (at5g44380 : 148.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_8334627g0010
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
A4A49_43067 No alias reticuline oxidase-like protein 0.04 Orthogroups_2024-Update
Glyma.04G113300 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
MA_132990g0010 No alias (at4g20860 : 342.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00036068-RA No alias (at1g30760 : 377.0) FAD-binding Berberine family... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 75 132
No external refs found!