- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at5g60200 : 114.0) Encodes a Dof-type transcription factor.; TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24463|pbf_maize : 99.4) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 228.0) & (original description: no original description)
Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_83624g0010 | |
| Cluster | HCCA clusters: Cluster_191 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_41416 | No alias | dof zinc finger protein dof1.4 | 0.02 | Orthogroups_2024-Update | |
| At2g34140 | No alias | Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967] | 0.04 | Orthogroups_2024-Update | |
| Bradi3g25670 | No alias | cycling DOF factor 1 | 0.04 | Orthogroups_2024-Update | |
| Brara.C03825.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Brara.G01208.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G144172 | No alias | OBF-binding protein 3 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G146283 | No alias | TARGET OF MONOPTEROS 6 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G171852 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G131500 | No alias | Dof-type zinc finger DNA-binding family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G177600 | No alias | OBF-binding protein 3 | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G039300 | No alias | OBF-binding protein 3 | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G215500 | No alias | cycling DOF factor 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G089300 | No alias | Dof-type zinc finger DNA-binding family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.19G118000 | No alias | cycling DOF factor 3 | 0.04 | Orthogroups_2024-Update | |
| LOC_Os08g38220 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00004776-RA | No alias | (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... | 0.03 | Orthogroups_2024-Update | |
| PSME_00020524-RA | No alias | (at5g62940 : 135.0) HCA2 induces the formation of... | 0.04 | Orthogroups_2024-Update | |
| PSME_00040668-RA | No alias | (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... | 0.05 | Orthogroups_2024-Update | |
| PSME_00041316-RA | No alias | (at5g39660 : 139.0) Dof-type zinc finger... | 0.03 | Orthogroups_2024-Update | |
| PSME_00052342-RA | No alias | (at5g62940 : 135.0) HCA2 induces the formation of... | 0.05 | Orthogroups_2024-Update | |
| PSME_00056872-RA | No alias | (at5g60200 : 116.0) Encodes a Dof-type transcription... | 0.04 | Orthogroups_2024-Update | |
| Potri.002G129600 | No alias | Dof-type zinc finger DNA-binding family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.004G038800 | No alias | OBF binding protein 4 | 0.04 | Orthogroups_2024-Update | |
| Potri.007G038100 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s385_53V6 | No alias | ascorbate oxidase promoter-binding protein aobp | 0.03 | Orthogroups_2024-Update | |
| Seita.3G371900.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G136300.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
| Solyc02g090310 | No alias | Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) | 0.03 | Orthogroups_2024-Update | |
| Solyc03g112930 | No alias | Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) | 0.02 | Orthogroups_2024-Update | |
| Solyc03g121400 | No alias | Dof zinc finger protein14 | 0.03 | Orthogroups_2024-Update | |
| Solyc08g082910 | No alias | Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA) | 0.04 | Orthogroups_2024-Update | |
| Sopen02g035000 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update | |
| Sopen06g031790 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update | |
| Sopen06g032440 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0004096 | catalase activity | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006260 | DNA replication | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003851 | Znf_Dof | 90 | 140 |
| No external refs found! |