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  5. MA_84062g0010

MA_84062g0010


Description : (at5g20480 : 322.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 264.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 644.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_84062g0010
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g05870 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g24310 No alias receptor-like protein kinase precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g07100 No alias receptor-like protein kinase precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10310 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_362112g0010 No alias (at5g20480 : 107.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
PSME_00025387-RA No alias (at4g36180 : 190.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00049305-RA No alias (at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
Potri.003G150100 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Potri.011G102800 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Seita.1G036300.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.8G118900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.002G075400.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.004G214800.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006808 regulation of nitrogen utilization IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 105 145
IPR013210 LRR_N_plant-typ 14 51
IPR001611 Leu-rich_rpt 399 458
IPR001611 Leu-rich_rpt 249 309
No external refs found!