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  5. MA_84207g0010

MA_84207g0010


Description : (at5g46170 : 343.0) F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G18380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q05736|pr1_aspof : 89.7) Pathogenesis-related protein 1 (AOPR1) - Asparagus officinalis (Garden asparagus) & (reliability: 686.0) & (original description: no original description)


Gene families : OG_42_0000982 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_84207g0010
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_14937 No alias f-box protein 0.03 Orthogroups_2024-Update
At1g30200 No alias F-box protein At1g30200 [Source:UniProtKB/Swiss-Prot;Acc:Q9C534] 0.03 Orthogroups_2024-Update
Bradi2g21750 No alias F-box family protein 0.03 Orthogroups_2024-Update
Bradi2g51180 No alias F-box family protein 0.02 Orthogroups_2024-Update
Brara.A00953.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.I02836.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Brara.I03368.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
LOC_Os01g59690 No alias OsFBX28 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g41130 No alias OsFBX168 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00032125-RA No alias (at5g46170 : 401.0) F-box family protein; CONTAINS... 0.04 Orthogroups_2024-Update
PSME_00035230-RA No alias (at5g46170 : 384.0) F-box family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00055199-RA No alias (at5g46170 : 341.0) F-box family protein; CONTAINS... 0.03 Orthogroups_2024-Update
Potri.002G094600 No alias F-box family protein 0.03 Orthogroups_2024-Update
Seita.5G355600.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.01 Orthogroups_2024-Update
Sobic.003G331600.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Sopen04g029120 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000916 Bet_v_I/MLP 1 125
No external refs found!