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Description : (at1g49230 : 131.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_85088g0010 | |
| Cluster | HCCA clusters: Cluster_296 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_11165 | No alias | ring-h2 finger protein atl8 | 0.03 | Orthogroups_2024-Update | |
| A4A49_29197 | No alias | ring-h2 finger protein atl73 | 0.02 | Orthogroups_2024-Update | |
| At3g10910 | No alias | RING-H2 finger protein ATL72... | 0.04 | Orthogroups_2024-Update | |
| At4g15975 | No alias | RING/U-box superfamily protein [Source:TAIR;Acc:AT4G15975] | 0.03 | Orthogroups_2024-Update | |
| Bradi1g15627 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g46040 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.E00282.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.H00897.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.K00650.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Glyma.07G062800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.07G078800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G070100 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G289100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G191800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G242500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G173800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G028400 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G014500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G079930.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G011010.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| MA_611616g0010 | No alias | (at1g49230 : 125.0) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
| MA_634100g0010 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
| MA_9143538g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| PSME_00003023-RA | No alias | (at1g72200 : 141.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00011913-RA | No alias | (at3g51430 : 162.0) Although this enzyme is predicted to... | 0.01 | Orthogroups_2024-Update | |
| PSME_00024216-RA | No alias | (at1g49230 : 130.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00034763-RA | No alias | (at5g05280 : 85.1) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.008G018900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.2G390800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G288401.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G279000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.005G012100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G110400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G205400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen05g033830 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00001128.32 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006808 | regulation of nitrogen utilization | IEP | Predicted GO |
| BP | GO:0017003 | protein-heme linkage | IEP | Predicted GO |
| BP | GO:0017004 | cytochrome complex assembly | IEP | Predicted GO |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 118 | 161 |
| No external refs found! |